PUBLICATIONS

O’Donncha, F., Akhriev, A., Fragoso, B. & John Icely 2024. Forecasting closures on shellfish farms using machine learning. Aquaculture International. https://doi.org/10.1007/s10499-024-01438-y

John Icely and Bruno Fragoso. (2023) Potential Effects of Climate Change on Offshore Aquaculture of the Mediterranean Mussel (Mytilus galloprovincialis, Lammarck 1819) ) in Portugal,” Journal of Shellfish Research 42(2), 223-235  https://doi.org/10.2983/035.042.0204

Ibon Galparsoro, Arantza Murillas, Kemal Pinarbasi, Ana M.M. Sequeira, Vanessa Stelzenmüller, Ángel Borja, Anne Marie O´Hagan, Adele Boyd, Suzanne Bricker, Joxe Mikel Garmendia, Antje Gimpel, Aline Gangnery, Suzannah-Lynn Billing, Øivind Bergh, Øivind Strand, Liu Hiu, Bruno Fragoso, John Icely, Jeffrey Ren, Nafsika Papageorgiou, Jon Grant, Daniele Brigolin, Roberto Pastres, Paul Tett 2020. Global stakeholder vision for ecosystem-based marine aquaculture expansion from coastal to offshore areas. https://onlinelibrary.wiley.com/doi/10.1111/raq.12422

Danchenko, S., Fragoso, B., Guillebault, D., Icely, J., Berzano, M., Newton, A., 2019. Harmful phytoplankton diversity and dynamics in an upwelling region (Sagres, SW Portugal) revealed by ribosomal RNA microarray combined with microscopy, Harmful Algae, 82,52–71. https://doi.org/10.1016/j.hal.2018.12.002

Tilstone, G., Mallor-Hoya, S., Gohin F., Andre Belocouto, A., Sá, C., Goela, P., Cristina, S., Airs, R. Icely, J., Zuehlke, M., Groom, S., 2017. Which Ocean Colour algorithm for MERIS and eutrophication indices in European coastal waters? Remote Sensing of Environment, 189, 132 – 151, Doi:http://dx.doi.org/10.1016/j.rse.2016.11.012.

Goela, P.G., Cristina, S., Kajiyama, T., Icely, J., Moore, G., Fragoso, B. and Newton, A., 2016. Algal Pigment Index 2 in the Atlantic off the Southwest Iberian Peninsula: standard and regional algorithms, Ocean Science Discussions, Doi:10.5194/os-2016-41, accepted for Ocean Science, 12, 1279-1288.. https://doi.org/10.5194/os-12-1279-2016

Cristina, S., Cordeiro, C., Lavender, S., Goela, P.G., Icely, J., Moore, G., Newton, A. 2016. MERIS Phytoplankton Time Series Products from the SW Iberian Peninsula (Sagres) Using Seasonal-Trend Decomposition Based on Loess, 8(6), 449, doi:10.3390/rs8060449.

Cristina, S., D’Alimonte, D., Goela, P.G., Kajiyama, T., Icely, J., Moore, G., Fragoso, B.D.D., Newton, A., 2016. Standard and Regional Bio-optical Algorithms for Chlorophyll a Estimates in the Atlantic off the Southwestern Iberian Peninsula. Geoscience and Remote Sensing Letters, IEEE, 13, 6, 757-761, DOI:10.1109/LGRS.2016.2529182.

Thaman, B., Icely, J. D., Fragoso, B. D., & Veitayaki, J. (2016). A comparison of rural community perceptions and involvement in conservation between the Fiji Islands and Southwestern Portugal. Ocean & Coastal Management, 133, 43-52. https://doi.org/10.1016/j.ocecoaman.2016.09.007

Goela, P.C., Cordeiro, C., Danchenko, S., Moore, G., Cristina, S., Icely, J., Newton, A., 2016 Time series analysis of SST and Upwelling components data in the Southwest Coast of Portugal: Seasons definition, Journal of Marine Systems, 163, 12-22, doi:10.1016/j.jmarsys.2016.06.002.

Cristina, S., Icely, J., Goela, P.C., DelValls, T.A., Newton, A., 2015. Using remote sensing as a support to the implementation of the European Marine Strategy Framework Directive in SW Portugal, Continental Shelf Research, 108, 169-177. DOI: https://doi.org/10.1016/j.csr.2015.03.011

Goela, P.C., Icely, J., Cristina, S., Danchenko, S., DelValls, T.A., Newton, A., 2015. Using bio-optical parameters as a tool for detecting changes in the phytoplankton community (SW Portugal), Estuarine, Coastal and Shelf Science, Special Issue 54, 167, 125-137. DOI: https://doi.org/10.1016/j.ecss.2015.07.037

Cristina, S., Moore, G. F., Goela, P.R.F.C., Icely, J.D., Newton, A., 2014. In situ validation of MERIS marine reflectance off the southwest Iberian Peninsula: assessment of vicarious adjustment and corrections for near-land adjacency. International Journal of Remote Sensing, 35(6), 2347-2377.

Goela, P.C., Danchenko, S., Icely, J., Lubián, L., Cristina, S., Newton, A., 2014. Using CHEMTAX to evaluate seasonal and interannual dynamics of the phytoplankton community off the South-west Coast of Portugal. Estuarine, Coastal and Shelf Science, 151, 112-123. DOI: https://doi.org/10.1016/j.ecss.2014.10.001

Stewart, A., Fragoso, B., Clímaco R., Icely, J., 2014. Evaluation of stakeholder perspectives on the management of the stalked barnacles (Pollicipes pollicipes) resource in the Parque Natural do Sudoeste Alentejano e CostaVicentina, Portugal. Marine Policy, v.43, pp. 71-79. DOI: 10.1016/j.marpol.2013.03.016 ISSN: 0308-597X.

Goela, P.C., Icely, J., Cristina, S., Newton, A., Moore, G., Cordeiro, C., 2013. Specific absorption coefficient of phytoplankton off the Southwest coast of the Iberian Peninsula: A contribution to algorithm development for ocean colour remote sensing. Continental Shelf Research, 52, 119-132. DOI:10.1016/j.csr.2012.11.009.

Dromph, K., Agusti, S., Basset, A., Franco, J., Henriksen, P., Icely, J., Lethinen, S., Moncheva, S., Revilla, M., Roselli, L., Sorensen, K., 2013. Sources of Uncertainty in assessment of marine phytoplankton communites. Hydrobiologia, v. 704, n. 1, pp. 253-264. DOI: 10.1007/s10750-012-1353-0 ISSN: 1573-5117

Zibordi, G., Ruddick, K., Ansko, I., Moore, G., Kratzer, S., Icely, J., Reinart, A., 2012.In situ determination of the remote sensing reflectance: an inter-comparison. Ocean Science, v. 8, n. 4, pp. 567–586. DOI: 10.5194/os-8-567-2012 ISSN: 1812-0784. Accession Number: WOS:00030961640001

Fragoso, B., Icely, J., 2009. Upwelling events and recruitment patterns of the major fouling species on coastal aquaculture (Sagres, Portugal). Journal of C oastal Research, SI 56, IC S 2009 Proceedings, pp. 419-423. ISSN: 0749-0208 Accession Number: WOS: 000266722300087

Loureiro, S., Newton, A., Icely, J.D., 2005. Microplankton composition, production and upwelling dynamics in Sagres (SW Portugal) during summer 2001. Sciencia Marina, v. 69, n. 3, pp. 323-341.